https://wiki.beaconcancer.org/index.php?action=history&feed=atom&title=Database%3A_European_Genome%E2%80%91phenome_Archive_%28EGA%29_Compilation_%28European_Union%29 Database: European Genome‑phenome Archive (EGA) Compilation (European Union) - Revision history 2026-10-17T06:07:52Z Revision history for this page on the wiki MediaWiki 1.39.5 https://wiki.beaconcancer.org/index.php?title=Database:_European_Genome%E2%80%91phenome_Archive_(EGA)_Compilation_(European_Union)&diff=36383&oldid=prev Francine: Created page with "<span style="display:none">forresearchers</span> <span style="display:none">europeanunion</span> <span style="display:none">isDatabase</span> Go back to European Union page '''Type of database:''' databaseType::genomics, databaseType::biobank. '''Primary purpose:''' Permanently archiving and sharing genetic, phenotypic, and clinical data generated for biomedical research projects. '''Sponsor, manager or home institution:''' dataOwner::European Genome-phe..." 2026-01-28T17:46:04Z <p>Created page with &quot;&lt;span style=&quot;display:none&quot;&gt;forresearchers&lt;/span&gt; &lt;span style=&quot;display:none&quot;&gt;europeanunion&lt;/span&gt; &lt;span style=&quot;display:none&quot;&gt;isDatabase&lt;/span&gt; Go back to <a href="/index.php?title=European_Union" title="European Union">European Union</a> page &#039;&#039;&#039;Type of database:&#039;&#039;&#039; <a href="/index.php?title=DatabaseType::genomics&amp;action=edit&amp;redlink=1" class="new" title="DatabaseType::genomics (page does not exist)">databaseType::genomics</a>, <a href="/index.php?title=DatabaseType::biobank&amp;action=edit&amp;redlink=1" class="new" title="DatabaseType::biobank (page does not exist)">databaseType::biobank</a>. &#039;&#039;&#039;Primary purpose:&#039;&#039;&#039; Permanently archiving and sharing genetic, phenotypic, and clinical data generated for biomedical research projects. &#039;&#039;&#039;Sponsor, manager or home institution:&#039;&#039;&#039; dataOwner::European Genome-phe...&quot;</p> <p><b>New page</b></p><div>&lt;span style=&quot;display:none&quot;&gt;forresearchers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;europeanunion&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;isDatabase&lt;/span&gt;<br /> Go back to [[European Union]] page<br /> <br /> &#039;&#039;&#039;Type of database:&#039;&#039;&#039; [[databaseType::genomics]], [[databaseType::biobank]].<br /> <br /> &#039;&#039;&#039;Primary purpose:&#039;&#039;&#039; Permanently archiving and sharing genetic, phenotypic, and clinical data generated for biomedical research projects.<br /> <br /> &#039;&#039;&#039;Sponsor, manager or home institution:&#039;&#039;&#039; [[dataOwner::European Genome-phenome Archive (EGA)]].<br /> <br /> &#039;&#039;&#039;Type of information:&#039;&#039;&#039; A wide range of genetic, phenotypic, and clinical data collected from biomedical research projects. This includes genomic data such as whole-genome sequencing, exome sequencing, and transcriptomic data, along with phenotypic information like disease characteristics, medical histories, and clinical outcomes. Additionally, the datasets contain clinical data that document patient treatments, diagnoses, medications, and responses to therapies. Many datasets also integrate genetic and phenotypic data to help understand the genetic basis of diseases, identify biomarkers, and explore treatment efficacy. These datasets support research across various diseases, including cancer, rare diseases, and conditions with complex genetic underpinnings. [https://ega-archive.org/datasets/ Click here to access].<br /> <br /> &#039;&#039;&#039;Cancer Areas of Interest:&#039;&#039;&#039; [[hasCancerType::C00-D48: All neoplasms]].<br /> <br /> &#039;&#039;&#039;Data access:&#039;&#039;&#039; [[dataAvailability::partially publicly available]]. Instructions on how to access databases can be found by clicking in the corresponding study [https://ega-archive.org/datasets/ click here to learn more].<br /> <br /> &#039;&#039;&#039;Contact information:&#039;&#039;&#039; [https://ega-archive.org/need-help/ Click here to learn more].<br /> <br /> &lt;span style=&quot;display:none&quot;&gt;Mouth&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Throat&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Oropharynx&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Nasopharynx&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Hypopharynx&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Larynx&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Salivary glands&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lips&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Tonsils&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;base of tongue&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Voice box&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Esophagus&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Stomach&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Small intestine&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Large intestine&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Colon&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Rectum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Anus&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Liver&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Gallbladder&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Bile ducts&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pancreas&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lung&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Trachea&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Bronchi&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pleura&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Mediastinum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Bone&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cartilage&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Osteosarcoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ewings sarcoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Skin&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Melanoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Scalp&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lips&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Hands&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Feet&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Muscle&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Fat&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Tendon&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ligament&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Blood vessels&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Connective tissue&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Sarcoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Angiosarcoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Liposarcoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lobular&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Breast&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Nipple&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Areola&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ductal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Vulva&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Vagina&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cervix&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Uterus&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ovary&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Fallopian tubes&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Endometrium&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Prostate&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Testicles&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Penis&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Kidney&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ureter&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Bladder&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Urethra&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Eye&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Brain&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Spinal cord&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Thyroid gland&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Parathyroid&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Adrenal glands&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pituitary gland&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pancreas&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Thymus gland&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Peritoneum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pericardium&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Retroperitoneum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Mesothelium&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Blood&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Bone marrow&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lymph nodes&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Spleen&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Leukemia&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C00-D48: All neoplasms&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C00-C97: All cancer types&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C00-C14: Mouth/throat cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C15-C26: Digestive system cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C30-C39: Lung/chest cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C40-C41: Bone cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C43-C44: Skin cancers/melanoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C45-C49: Soft tissue cancer&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C50: Breast cancer&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C51-C58: Female genitalia cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C60-C63: Male genitalia cancer&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C64-C68: Urinary system cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C69-C72: Eye and brain cancer&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C73-C75: Thyroid and other gland cancers&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C76-C80: Cancers of unknown or unspecified areas&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C81-C96: Cancers of the blood and immune system&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::C97-C97: Cancers in multiple locations from the start&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::D00-D09: Early-stage cancers not yet spread&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::D10-D36: Benign tumour&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::D37-D48: Growths of uncertain nature&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;hasCancerType::unknown&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Head&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Neck&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Oral&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Oral cavity&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pharynx&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pharyngeal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Tongue&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lingual&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Nasal cavity&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Nasal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Sinonasal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Sinus&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Sinuses&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Paranasal sinuses&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ear&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Mandible&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Maxilla&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Jaw&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Esophageal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Gastric&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Intestinal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Bowel&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Colorectal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Appendix&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Appendiceal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Duodenum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Jejunum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ileum&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Anal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Perianal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Hepatic&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Biliary&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Hepatobiliary&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pulmonary&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Thorax&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Thoracic&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Chest&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Mediastinal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Pleural&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cutaneous&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Dermal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Epidermal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Subcutaneous&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Skeletal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Osseous&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Chondral&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Extremity&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Axilla&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Axillary&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Mammary&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cervical&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Uterine&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Endometrial&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ovarian&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Tubal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Fallopian&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Vaginal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Vulvar&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Adnexal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Renal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Urothelial&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ureteral&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Urethral&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Prostatic&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Testicular&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Penile&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Ocular&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Orbital&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Retinal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Optic nerve&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Meninges&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Meningeal&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cerebral&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cerebellar&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Brainstem&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lymphatic&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lymphoid&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Lymphoma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Hematologic&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Hematopoietic&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Myeloma&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Plasma cell&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Diaphragm&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Peripheral nerve&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Heart&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Cardiac&lt;/span&gt;<br /> &lt;span style=&quot;display:none&quot;&gt;Endocrine&lt;/span&gt;</div> Francine